Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCTTGGGCCAGT
..(((((...(((.((((((((&))))))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001354420
GeneSymbolPCDH15
Binding site399,417
Score0.846
Seed0
Au0.529
Energy-17.2
Binding len18
Me-10.426
Phylopstem0.527311625
Phylopflank0.9013807499999998
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end8
PositionCDS
2D Structure