Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAGATGGCTTTTATTTTGTTTGCAGCTGACAC
.((((((((((((((((((((&)))))))))................))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016530
GeneSymbolRAB8B
Binding site4450,4488
Score1.0
Seed1
Au0.603
Energy-23.0
Binding len38
Me-3.793
Phylopstem1.7425723486486484
Phylopflank1.3242715356625003
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end8
Position3UTR
2D Structure