Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTTTGTACTTATTTGAAAATATAGGAACAATTTAGCAGCTGCAAA
((((((((((((((((.....&.))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016530
GeneSymbolRAB8B
Binding site2288,2336
Score1.0
Seed1
Au0.721
Energy-22.1
Binding len20
Me-3.938
Phylopstem0.23150483333333335
Phylopflank0.36906101125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure