Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAAAGCAGTTGTGAA
((((((((((..(((.(((((&)))))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016544
GeneSymbolDNAJC27
Binding site819,839
Score1.0
Seed1
Au0.5
Energy-20.5
Binding len20
Me-10.342
Phylopstem0.36939834600000004
Phylopflank0.33880128574999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure