Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGATGCGTGGCTGGCAGA
(((((((((((....(((((.&)))))...)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016544
GeneSymbolDNAJC27
Binding site368,389
Score0.846
Seed1
Au0.485
Energy-19.1
Binding len21
Me-10.166
Phylopstem-0.039043516666666674
Phylopflank0.2667189674999999
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure