Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGAAGCCAGGTG
(((((((......(((((....&)))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016546
GeneSymbolC1RL
Binding site2343,2359
Score0.846
Seed1
Au0.441
Energy-17.4
Binding len16
Me-16.011
Phylopstem-0.10685714285714289
Phylopflank1.1256337749999998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure