Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTATTATCAGGCCGCGGCAGCAGG
((((.((((((((((((.(((&))).))).....))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016546
GeneSymbolC1RL
Binding site624,651
Score0.923
Seed0
Au0.338
Energy-22.2
Binding len27
Me-8.057
Phylopstem-0.5825822176470588
Phylopflank-0.3337544937499999
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure