Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGTAACCGTAGCAAAACTGCAT
.(((((((((((((((((...&))))))))))))).....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016556
GeneSymbolPSMC3IP
Binding site1297,1320
Score0.923
Seed1
Au0.765
Energy-19.0
Binding len23
Me-3.793
Phylopstem1.2683919545454545
Phylopflank1.3814333591666665
Longest consecutive pairings13
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure