Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTCCGGCAGCTGCGGGAGCTGTCCCGCCAGTGGCTGCGGC
(((((((((((((((((((((&)))))...))))))))..................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016558
GeneSymbolSCAND1
Binding site732,775
Score0.846
Seed1
Au0.309
Energy-20.9
Binding len43
Me-3.938
Phylopstem-0.17822997142857133
Phylopflank0.06654657625000002
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure