Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAAGAGGAGCTGCAGA
((((((((.(..((((.....&))))..).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016565
GeneSymbolCOA4
Binding site321,338
Score0.846
Seed1
Au0.368
Energy-18.5
Binding len17
Me-11.166
Phylopstem0.397568725
Phylopflank0.24363882999999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure