Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGCAACAAAAAGAAAGCTGCGT
.(((((((...(((((.((((&)))).)))))........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016567
GeneSymbolBCCIP
Binding site722,748
Score0.846
Seed1
Au0.662
Energy-18.9
Binding len26
Me-8.917
Phylopstem1.1602098571428574
Phylopflank2.434527536249999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure