Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGAACACCATGCGCCCGCGGCTGCGC
.(((((((((((.((((.(((&.))).)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016569
GeneSymbolTBX3
Binding site2863,2892
Score1.0
Seed1
Au0.338
Energy-28.9
Binding len22
Me-5.082
Phylopstem5.18435881818182
Phylopflank5.029525575000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure