Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTTGGTGCTGGCTGCAAC
(((((((((((.(.((((((.&))))))..).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016571
GeneSymbolLGSN
Binding site1285,1308
Score0.923
Seed1
Au0.485
Energy-23.3
Binding len23
Me-8.141
Phylopstem0.5887906
Phylopflank0.14569611749999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure