Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCGCCTGCAAACCAGGTGCGGGGCCATCCGGGCGAAGGAGCTGGTGG
(((((((((((((((((((...&.))))))..))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001354435
GeneSymbolC4orf54
Binding site2124,2175
Score1.0
Seed1
Au0.324
Energy-27.6
Binding len23
Me-3.938
Phylopstem0.1691970857142857
Phylopflank0.27988359250000006
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure