Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTCCAGCGGAGCCTCCAGTGC
((((((((((...((((((((.&)))).)))).))))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001354435
GeneSymbolC4orf54
Binding site2176,2200
Score0.846
Seed1
Au0.382
Energy-24.9
Binding len24
Me-11.398
Phylopstem0.07856590769230769
Phylopflank0.14802604125
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure