Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTTACATGAGCCAGGC
.((((((.....((((((((..&))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016580
GeneSymbolPCDH12
Binding site4569,4586
Score0.885
Seed1
Au0.662
Energy-16.9
Binding len17
Me-14.577
Phylopstem3.0563882375
Phylopflank3.1707644937499997
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure