Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTTCTGTGGGCCAGTGAGAGAAACTGGGGGATATCAAGCAGGCAGGCAGGGTCTC
(((((((((.((((((((.((&.))))))........))))..))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_016580
GeneSymbolPCDH12
Binding site5538,5594
Score0.846
Seed1
Au0.412
Energy-30.2
Binding len31
Me-5.18
Phylopstem0.3201045
Phylopflank0.04624645250000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure