Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCAGCAAAGAGGCAGCTGCAAC
((((((((((..(((((((((&)))))...))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354435
GeneSymbolC4orf54
Binding site5500,5527
Score0.923
Seed1
Au0.456
Energy-24.7
Binding len27
Me-10.109
Phylopstem0.9516572999999999
Phylopflank0.7952246525
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure