Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGCCCAGCTGCAT
.((((((((.(((...(((((&))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354435
GeneSymbolC4orf54
Binding site5624,5642
Score1.0
Seed1
Au0.412
Energy-23.4
Binding len18
Me-6.861
Phylopstem0.4578545375
Phylopflank1.0835902849999997
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure