Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCAGGTGTTGCAGCTGCC
..(((((((((((((.(((((&))))).)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016580
GeneSymbolPCDH12
Binding site543,566
Score0.846
Seed1
Au0.353
Energy-22.8
Binding len23
Me-5.19
Phylopstem0.6228982125
Phylopflank0.865685425
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure