Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGAGCAGCCAATCAGCTAGCT
..(((((((.((((((..((.&))..))))))...))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016580
GeneSymbolPCDH12
Binding site5202,5224
Score0.846
Seed1
Au0.559
Energy-20.4
Binding len22
Me-6.2
Phylopstem2.8377309875
Phylopflank1.5274618912499998
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure