Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCAGGAAGGGGCTGGCCTCTGCTGAGCTGCT
..((((((.((((....((((&.))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016583
GeneSymbolBPIFA1
Binding site841,877
Score0.846
Seed1
Au0.382
Energy-18.6
Binding len18
Me-7.839
Phylopstem0.04262561333333329
Phylopflank0.24408921374999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure