Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCAGTGGGGCTGCTGTTATCTG&CAGAGCTGTGCCTGGGGGCAGCAGCCCTGCCTGGA
((((((((((((((((..(((.&.))).))))))))))))).))).
Details
MiRNAhsa-miR-194-3p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site217,252
Score0.923
Seed1
Au0.353
Energy-30.6
Binding len23
Me-3.938
Phylopstem0.4380058152941176
Phylopflank0.80014749925
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure