Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCAGCATCAGTGATTTTGTTG&GGCAAAAAGATGCTGGGG
(((((((((.....(((((((.&))))))).))))))))).
Details
MiRNAhsa-miR-338-3p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site152,170
Score0.846
Seed1
Au0.485
Energy-17.1
Binding len18
Me-13.498
Phylopstem1.4334280000000001
Phylopflank0.4828571189999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure