Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAAGTGCTTCCCTTTGGACTGT&CAGCCAGATTTGAGAAGAAGGCAAAAAGATGCTGGGGAGCAG
....(((((((((((((.(((.&)))))))).........................)))))))).
Details
MiRNAhsa-miR-520a-3p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site133,175
Score0.846
Seed0
Au0.485
Energy-18.5
Binding len42
Me-9.547
Phylopstem0.6448682231578946
Phylopflank0.60293920525
Longest consecutive pairings8
Position of longest consecutive pairings34
Pairings in 3prime end6
Position5UTR
2D Structure