Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATGCACCCGGGCAAGGATTCT&GGGTCTTTGCCCATGGAGCAG
..(((.((.((((((((((((.&))))))))))))..)).))).
Details
MiRNAhsa-miR-501-3p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site693,714
Score0.846
Seed0
Au0.382
Energy-24.5
Binding len21
Me-7.914
Phylopstem2.323380916666667
Phylopflank1.2463417225
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure