Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATGCACCCGGGCAAGGATTCT&AGAAGCTCTGCACACTGGCCTGGAGTGCAC
..(((((((((((.((..((((&))))..........)).)))))).))))).
Details
MiRNAhsa-miR-501-3p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site273,303
Score0.846
Seed1
Au0.485
Energy-20.2
Binding len30
Me-5.814
Phylopstem1.4789864166666666
Phylopflank1.1457504947500001
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure