Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGTGCCTGAGGGAGTAAGAGCCC&GGCCAAGATAAATCTACCACCCCAGGCACC
.(((((((.(((.((.((((((.&))).........)))))..)))))))))).
Details
MiRNAhsa-miR-550a-5p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site776,806
Score0.846
Seed1
Au0.5
Energy-22.3
Binding len30
Me-6.372
Phylopstem-0.07952257142857144
Phylopflank-0.06434345875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure