Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGTGCCTGAGGGAGTAAGAG&TCTACCACCCCAGGCACC
.(((((((.(((.((.(((.&)))))..)))))))))).
Details
MiRNAhsa-miR-550a-3-5p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site788,806
Score0.923
Seed1
Au0.5
Energy-20.4
Binding len18
Me-6.372
Phylopstem-0.07952257142857144
Phylopflank-0.06434345875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure