Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGAGCTGAGGCTCTGGGGGTG&CAGTCCCAGCCAGCCATGGCAGCGTCTCCT
.(((((((((.((((((((((.((&)).))))))..))))....)))).))))).
Details
MiRNAhsa-miR-939-5p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site610,640
Score0.846
Seed1
Au0.397
Energy-29.1
Binding len30
Me-6.618
Phylopstem1.2397350833333334
Phylopflank1.04256311
Longest consecutive pairings6
Position of longest consecutive pairings21
Pairings in 3prime end7
PositionCDS
2D Structure