Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGGCAGGGCCCCCGCTCCCC&GGGGAGCAGAGCTGTAATGCTGCTGTTGCTGCTGCCCTGGACAGCTCAGGGCAGAGCTGTGCCTGGGGGCAGCAGCCCTGCCTG
.((((((((((((((((((((&.)))..))))........)))).....))))))))).
Details
MiRNAhsa-miR-940
RefseqIDNM_016584
GeneSymbolIL23A
Binding site166,250
Score0.923
Seed1
Au0.353
Energy-32.6
Binding len37
Me-3.793
Phylopstem0.7825749194285714
Phylopflank0.5834138799999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure