Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGAGTGGGAGCCCCAGTGTGTG&CACCACTGGGAGACTCAGCAGATTCCAAGCCTCAG
.((((((((((((((((((.(((&)))))))))).).)))........)))...)))).
Details
MiRNAhsa-miR-1238-5p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site578,613
Score0.846
Seed1
Au0.382
Energy-22.3
Binding len35
Me-3.793
Phylopstem0.426187929032258
Phylopflank1.5825370887499997
Longest consecutive pairings10
Position of longest consecutive pairings25
Pairings in 3prime end7
PositionCDS
2D Structure