Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTCCTGAGCCATTCTGAGCCTC&GAGTCCCTAAAGGCAGCAGCTCAAGGATGGCACTCAGA
...((((((((((((((((...&.))))).)))))))..)))).
Details
MiRNAhsa-miR-1200
RefseqIDNM_016584
GeneSymbolIL23A
Binding site721,759
Score0.808
Seed0
Au0.471
Energy-22.7
Binding len21
Me-6.515
Phylopstem1.0474877842105266
Phylopflank1.046527445
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure