Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGAGGGAGGAGATGGGCCAAGTT&GATTCCAAGCCTCAGTCCCAGCCAGCCATGGCAGCGTCTCCTTCTCCG
.(((.((((((((((.((((.(((&.)))..))))..))))))))))))).
Details
MiRNAhsa-miR-1249-5p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site598,646
Score1.0
Seed0
Au0.382
Energy-26.8
Binding len26
Me-8.145
Phylopstem0.8792244300000001
Phylopflank1.2106607662499997
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure