Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGCGGAGCTTCCGGAGGCC&GCCTCCAGGCCTTTGTGGCTGTAGCCGCCCGGG
(.((((((((((..((((((((&.)))))))).))))....)))))).).
Details
MiRNAhsa-miR-3180-3p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site663,696
Score0.846
Seed1
Au0.368
Energy-30.1
Binding len27
Me-7.247
Phylopstem1.7690975571428573
Phylopflank1.7030593787500004
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure