Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAAAGTAACTGCGGTTTTTGCCT&AGGCAAAAAGATGCTGGGGAGCAGAGCTGTAATGCTGCTGTTGCTG
...((((((.(((((((((((((&)))))))).........................))))).)))))).
Details
MiRNAhsa-miR-548w
RefseqIDNM_016584
GeneSymbolIL23A
Binding site151,197
Score1.0
Seed0
Au0.412
Energy-20.4
Binding len46
Me-7.757
Phylopstem0.6202044173684209
Phylopflank0.39792078224999994
Longest consecutive pairings8
Position of longest consecutive pairings38
Pairings in 3prime end8
Position5UTR
2D Structure