Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGGGCGGCAGGGGCCTC&GAGCTGTAATGCTGCTGTTGCTGCTGCCCTGG
(((((((((((.(((...&.))).))))))))))).
Details
MiRNAhsa-miR-3196
RefseqIDNM_016584
GeneSymbolIL23A
Binding site174,206
Score1.0
Seed1
Au0.353
Energy-27.0
Binding len17
Me-7.517
Phylopstem0.6689718345454545
Phylopflank0.44478231349999997
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure