Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGAGTCCTGGGGAATGGAGA&TCTCCATGGCCCAGCAAGGCCAAGATAAATCTACC
(((((((((((((..(((((((&)))))))..)))))...))).........))))).
Details
MiRNAhsa-miR-3198
RefseqIDNM_016584
GeneSymbolIL23A
Binding site759,794
Score0.846
Seed1
Au0.456
Energy-22.9
Binding len35
Me-5.53
Phylopstem0.006384664000000017
Phylopflank0.32735555000000005
Longest consecutive pairings7
Position of longest consecutive pairings28
Pairings in 3prime end7
Position3UTR
2D Structure