Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGCGGAGCTTCCGGAG&CTGGGGGCAGCAGCCCTG
.((((((..((((((((..&))))))))..).))))).
Details
MiRNAhsa-miR-3180
RefseqIDNM_016584
GeneSymbolIL23A
Binding site228,246
Score0.827
Seed1
Au0.338
Energy-22.6
Binding len18
Me-7.163
Phylopstem0.2846722725
Phylopflank0.8206494067500001
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure