Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGGTTGGGGCGGGCTCTG&CAGCAGCCCTGCCTGGACTCAG
.((((((.((((((((((((&))).))))).)))).)))))).
Details
MiRNAhsa-miR-3940-5p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site235,257
Score0.846
Seed1
Au0.368
Energy-28.4
Binding len22
Me-6.107
Phylopstem0.7323658928571428
Phylopflank0.9524469364999999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure