Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGCATAGGAGAGGGTTGATAT&TGTGGGCCAGCTTCATGCCTC
.((((((.((((..((((.(((.&))).))))..)))))))))).
Details
MiRNAhsa-miR-3945
RefseqIDNM_016584
GeneSymbolIL23A
Binding site520,541
Score0.846
Seed1
Au0.368
Energy-21.5
Binding len21
Me-8.253
Phylopstem2.0696483333333333
Phylopflank1.1028248975
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure