Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGAGCGGCCCCCGGGTGGG&CTCAGGGCAGAGCTGTGCCTGGGGGCAGCAGCCCT
.(((..((.(((((((((((.(&.).))))))))))).))..))).
Details
MiRNAhsa-miR-1343-5p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site210,245
Score0.846
Seed0
Au0.353
Energy-32.8
Binding len23
Me-10.87
Phylopstem0.44176408727272726
Phylopflank0.9504948535000002
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure