Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCTGCCTCTGTCCAGGTCCTT&GGAAGTGGGCAGAGATTCCACCAGGACTGGTGCAAGGCGCAGAGC
(((((((((((((((..(((..&)))..)))))))))........................)))))).
Details
MiRNAhsa-miR-5001-3p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site88,133
Score0.923
Seed1
Au0.456
Energy-23.9
Binding len45
Me-4.171
Phylopstem0.614354384102564
Phylopflank0.48090436475000004
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end4
Position5UTR
2D Structure