Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGGCTCAGGGATTGGATGGAGG&CCTTCTCTGCTCCCTGATAGCCCTGT
(((((((((((((.((((.(((((&))))))))).)))))))..)))))).
Details
MiRNAhsa-miR-5088-5p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site497,523
Score1.0
Seed1
Au0.382
Energy-31.8
Binding len26
Me-4.794
Phylopstem0.31678356
Phylopflank1.7918665362499997
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure