Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCGGGGCAGATTGGTGTAGGGTG&GCCCTGCCTGGACTCAGTGCCAGCAGCTTTCACAGAAGCTCTGCACACTGGCCTGGA
(((((.(((....(((((((((.&.))))))))).))).))))).
Details
MiRNAhsa-miR-5090
RefseqIDNM_016584
GeneSymbolIL23A
Binding site240,297
Score0.846
Seed0
Au0.441
Energy-25.8
Binding len21
Me-14.542
Phylopstem1.0863054444444442
Phylopflank0.8343171409999999
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure