Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCAGTGACTGAGCTGGAGCCA&GCCTGGACTCAGTGCCAGCAGCTTTCACAGAAGCTCTGCACACTGGC
((((((((((((((((.((..&)))))).))))))...........................)))))).
Details
MiRNAhsa-miR-5190
RefseqIDNM_016584
GeneSymbolIL23A
Binding site245,292
Score0.846
Seed1
Au0.441
Energy-19.7
Binding len47
Me-3.938
Phylopstem1.205036904090909
Phylopflank0.56486433075
Longest consecutive pairings6
Position of longest consecutive pairings41
Pairings in 3prime end5
PositionCDS
2D Structure