Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGAAATGCTGGACTAATCTGC&GCAGATTCCAAGCCTCAGTCCCAGCCAGCCATGGCAGCGTCTCC
((((..((((((((((((((((&))))))).........)))))...........))))...)))).
Details
MiRNAhsa-miR-5680
RefseqIDNM_016584
GeneSymbolIL23A
Binding site595,639
Score0.846
Seed0
Au0.412
Energy-19.0
Binding len44
Me-9.958
Phylopstem1.1886355194444445
Phylopflank1.2962953874999998
Longest consecutive pairings7
Position of longest consecutive pairings37
Pairings in 3prime end8
PositionCDS
2D Structure