Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGGGAGGGAAGACAGCTGGAGA&TCTGCTCCCTGATAGCCCTGTGGGCCAGCTTCATGCCTCCCT
..((((((.(.((.((((((...&.)))))))).).)))))).
Details
MiRNAhsa-miR-6780a-5p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site502,544
Score0.923
Seed1
Au0.353
Energy-25.5
Binding len19
Me-9.695
Phylopstem0.2512369
Phylopflank1.5357555425
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure