Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGAAGCAAGAGAACCCTGTGG&TCACAGGGGAGCCTTCTCTGCTCCCTG
(((.(((.((((((((((((((&)))))))).....))))))))).))).
Details
MiRNAhsa-miR-6828-5p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site486,513
Score1.0
Seed0
Au0.426
Energy-25.6
Binding len27
Me-9.283
Phylopstem1.688495763157895
Phylopflank1.3438707650000001
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end8
PositionCDS
2D Structure