Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGAAGGCTTGGCAGGGAAGA&CTTCTCTGCTCCCTGATAGCCCTGTGGGCCAGCTTCATGCCTCCCTAC
(((((.((((.(((((((((((.&)))))))))..........................)).))))))))).
Details
MiRNAhsa-miR-6780b-5p
RefseqIDNM_016584
GeneSymbolIL23A
Binding site498,546
Score0.846
Seed0
Au0.368
Energy-26.1
Binding len48
Me-8.663
Phylopstem0.8624223702702704
Phylopflank1.5508209849999997
Longest consecutive pairings9
Position of longest consecutive pairings39
Pairings in 3prime end7
PositionCDS
2D Structure